User contributions for Henni

11 December 2024

• 15:1915:19, 11 December 2024 diff hist +16‎ Link collection ‎ →‎Multiple alignment current

2 December 2024

• 09:2109:21, 2 December 2024 diff hist +2‎ 22111:Course plan autumn 2024 ‎ →‎Monday Dec 16 current

27 November 2024

• 11:4111:41, 27 November 2024 diff hist +38‎ Exercise: Phylogeny - Answers (Seaview version) ‎ →‎Step 10 current
• 11:2611:26, 27 November 2024 diff hist 0‎ N File:Ribosomal proteins 34-NJ tree.unrooted.newick.txt ‎No edit summary current
• 11:2411:24, 27 November 2024 diff hist +14‎ Exercise: Phylogeny - Answers (Seaview version) ‎ →‎Step 10

26 November 2024

• 17:0317:03, 26 November 2024 diff hist +151‎ Exercise: Phylogeny - Answers (Seaview version) ‎ →‎Step 10
• 15:3115:31, 26 November 2024 diff hist 0‎ Exercise: Phylogeny - Answers (Seaview version) ‎ →‎Step 9
• 12:4012:40, 26 November 2024 diff hist −1‎ Exercise: Phylogeny - Answers (Seaview version) ‎ →‎Step 9
• 12:3912:39, 26 November 2024 diff hist +1‎ Exercise: Phylogeny - Answers (Seaview version) ‎ →‎Step 9

15 November 2024

• 16:1916:19, 15 November 2024 diff hist +31‎ Exercise: BLAST2 ‎ →‎BLAST example 2 current
• 16:1716:17, 15 November 2024 diff hist 0‎ ExBlast-Answers2 ‎ →‎QUESTION 3.3 current
• 16:1516:15, 15 November 2024 diff hist 0‎ ExBlast-Answers ‎ →‎QUESTION 3.3 current
• 16:1416:14, 15 November 2024 diff hist 0‎ ExBlast-Answers3 ‎ →‎QUESTION 3.1 current
• 16:1216:12, 15 November 2024 diff hist 0‎ FAQ ‎ →‎EasyPred current
• 16:1116:11, 15 November 2024 diff hist +31‎ Exercise: BLAST3 ‎ →‎BLAST example 2 current
• 16:0616:06, 15 November 2024 diff hist 0‎ Exercise: Construction of sequence logos and weight matrices ‎ →‎Construction of weightmatrices current
• 16:0516:05, 15 November 2024 diff hist +31‎ Exercise: BLAST ‎ →‎BLAST example 2 current
• 15:5815:58, 15 November 2024 diff hist −2‎ m Checklist for computers ‎ →‎Software current
• 14:3014:30, 15 November 2024 diff hist −69‎ 22111:Course plan autumn 2024 ‎ →‎Tuesday Oct 8 — Protein structure, PDB & PyMOL

14 November 2024

• 11:4711:47, 14 November 2024 diff hist +132‎ ExPSIBLAST answer ‎ →‎Finding a remote homolog (on your own) current

13 November 2024

• 17:1717:17, 13 November 2024 diff hist −2‎ ExPSIBLAST answer ‎ →‎One more round
• 16:5816:58, 13 November 2024 diff hist 0‎ ExPSIBLAST answer ‎ →‎Saving and reusing the PSSM
• 16:3616:36, 13 November 2024 diff hist 0‎ ExPSIBLAST answer ‎ →‎Trying another approach
• 15:5815:58, 13 November 2024 diff hist +6‎ Exercise: Multiple Alignments (Seaview version) ‎ →‎Step 7 current
• 15:5715:57, 13 November 2024 diff hist +6‎ Exercise: Multiple Alignments (Seaview version) ‎ →‎Part 1 — using Clustal Omega in Seaview
• 15:2915:29, 13 November 2024 diff hist +49‎ Exercise: Multiple Alignments (Seaview version) ‎ →‎Step 7
• 12:3812:38, 13 November 2024 diff hist −1‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Afternoon: Phylogenetic trees current
• 12:3812:38, 13 November 2024 diff hist 0‎ N File:Gorm phylogeny newbackground rwe BP.pdf ‎No edit summary current
• 12:3712:37, 13 November 2024 diff hist −53‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Afternoon: Phylogenetic trees

11 November 2024

• 17:2517:25, 11 November 2024 diff hist +186‎ Exercise: Multiple Alignments (Seaview version) ‎ →‎Step 8
• 16:5116:51, 11 November 2024 diff hist +6‎ Exercise: Multiple Alignments (Seaview version) ‎ →‎Part 1 — using Clustal Omega in Seaview
• 16:3416:34, 11 November 2024 diff hist 0‎ N File:Handout distance answers.pdf ‎No edit summary current
• 13:4313:43, 11 November 2024 diff hist 0‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Afternoon: Profile searching with PSI-BLAST

7 November 2024

• 17:5317:53, 7 November 2024 diff hist −1‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Morning: Sequence information and logo plots
• 12:1612:16, 7 November 2024 diff hist −42‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Afternoon: Sequence database searching with BLAST
• 12:1612:16, 7 November 2024 diff hist 0‎ N File:Lecture BLAST CBQ BP 2024.pdf ‎No edit summary current

6 November 2024

• 12:5512:55, 6 November 2024 diff hist −5‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Afternoon: Protein structure, PDB & PyMOL
• 12:4512:45, 6 November 2024 diff hist −42‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Afternoon: Protein structure, PDB & PyMOL
• 12:4412:44, 6 November 2024 diff hist 0‎ N File:PyMol tutorial2017 v4.pdf ‎No edit summary current
• 09:4809:48, 6 November 2024 diff hist −50‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Morning: Translation and UniProt
• 09:4709:47, 6 November 2024 diff hist 0‎ N File:Lecture UniProt 2024.pdf ‎No edit summary current

4 November 2024

• 11:4111:41, 4 November 2024 diff hist +89‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Morning: Introduction, plain text files and taxonomy databases
• 11:4011:40, 4 November 2024 diff hist 0‎ N File:On evolution and sequences 2024.pdf ‎No edit summary current

3 November 2024

• 16:2316:23, 3 November 2024 diff hist 0‎ N File:Lecture GenBank 2024.pdf ‎No edit summary current
• 16:2216:22, 3 November 2024 diff hist +125‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Afternoon: GenBank
• 15:3615:36, 3 November 2024 diff hist +108‎ Bioinformatics in practice, Faroe Islands 2022 ‎No edit summary current
• 15:2315:23, 3 November 2024 diff hist +108‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Morning: Introduction, plain text files and taxonomy databases
• 15:1915:19, 3 November 2024 diff hist 0‎ N File:Intro+bioinformaticsFO24.pdf ‎No edit summary current

24 October 2024

• 13:2413:24, 24 October 2024 diff hist +28‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Afternoon: Phylogenetic trees
• 13:2313:23, 24 October 2024 diff hist −1‎ Bioinformatics in practice, Faroe Islands 2024 ‎ →‎Morning: Multiple alignments