User contributions for Mick

15 January 2026

• 15:3615:36, 15 January 2026 diff hist +7‎ Program 2026 ‎No edit summary current
• 15:3515:35, 15 January 2026 diff hist +1‎ Program 2026 ‎No edit summary
• 15:3515:35, 15 January 2026 diff hist +10‎ Program 2026 ‎No edit summary
• 15:3415:34, 15 January 2026 diff hist +88‎ Program 2026 ‎No edit summary

14 January 2026

• 13:2013:20, 14 January 2026 diff hist +16‎ Program 2026 ‎No edit summary

13 January 2026

• 17:5017:50, 13 January 2026 diff hist 0‎ Postprocess exercise ‎No edit summary current
• 17:5017:50, 13 January 2026 diff hist −40‎ Postprocess exercise ‎No edit summary

12 January 2026

• 16:4116:41, 12 January 2026 diff hist +34‎ Exercise ‎No edit summary current
• 10:1410:14, 12 January 2026 diff hist +46‎ Program 2026 ‎No edit summary
• 09:4409:44, 12 January 2026 diff hist +1,006‎ Program 2026 ‎No edit summary

11 January 2026

• 08:5008:50, 11 January 2026 diff hist +245‎ Exercise ‎No edit summary
• 08:4708:47, 11 January 2026 diff hist +67‎ Exercise ‎No edit summary
• 08:4308:43, 11 January 2026 diff hist +72‎ Exercise ‎No edit summary
• 08:3708:37, 11 January 2026 diff hist +5,373‎ N Solution ‎ Created page with "<hr> <h2>Answers</h2> <p><b>Marsupials Newick</b></p> <pre> myTree <- read.tree(text = "((Echidna,Platypus),(American_Opossums,(Monito_del_Monte,((((Koalas,Wombats),(Possums,(Kangaroos,Wallabies))),(((Bandicoots,Bilby),Marsupial_Mole),((Tasmanian_Devil,Tasmanian_Tiger),Numbats)))))));") </pre> <p><b>Q1.</b> The two trees contain the same information about relationships, but the rooted tree additionally contains information about the most recent common ancestor of..." current
• 08:3508:35, 11 January 2026 diff hist +11,557‎ Exercise ‎No edit summary

9 January 2026

• 20:0120:01, 9 January 2026 diff hist −1‎ Program 2026 ‎No edit summary
• 11:1811:18, 9 January 2026 diff hist −20‎ Ancient DNA exercise ‎No edit summary current
• 11:0711:07, 9 January 2026 diff hist +106‎ Ancient DNA exercise ‎No edit summary
• 09:4809:48, 9 January 2026 diff hist +94‎ Program 2026 ‎No edit summary
• 09:0909:09, 9 January 2026 diff hist −291‎ Exercise and answers ‎No edit summary current
• 09:0209:02, 9 January 2026 diff hist +1,918‎ Exercise and answers ‎No edit summary

8 January 2026

• 11:2611:26, 8 January 2026 diff hist +14‎ Denovo exercise ‎No edit summary current
• 11:2011:20, 8 January 2026 diff hist +69‎ Denovo exercise ‎No edit summary
• 10:2310:23, 8 January 2026 diff hist +198‎ Exercise and answers ‎No edit summary
• 10:1810:18, 8 January 2026 diff hist +735‎ Exercise and answers ‎No edit summary
• 10:1510:15, 8 January 2026 diff hist +830‎ Exercise and answers ‎No edit summary
• 10:1210:12, 8 January 2026 diff hist +59‎ Denovo exercise ‎No edit summary
• 09:5309:53, 8 January 2026 diff hist 0‎ Program 2026 ‎No edit summary
• 09:4109:41, 8 January 2026 diff hist +2‎ Program 2026 ‎No edit summary
• 09:3409:34, 8 January 2026 diff hist −4‎ Program 2026 ‎No edit summary

7 January 2026

• 15:5515:55, 7 January 2026 diff hist +337‎ SNP calling exercise answers part 1 ‎No edit summary current
• 14:2414:24, 7 January 2026 diff hist +263‎ SNP calling exercise answers part 2 ‎No edit summary current
• 12:4812:48, 7 January 2026 diff hist +29‎ Rnaseq exercise ‎No edit summary current
• 11:5911:59, 7 January 2026 diff hist +50‎ SNP calling exercise part 2 ‎No edit summary current
• 11:1711:17, 7 January 2026 diff hist 0‎ Exercise and answers ‎No edit summary
• 11:1711:17, 7 January 2026 diff hist +39‎ Exercise and answers ‎No edit summary
• 11:1211:12, 7 January 2026 diff hist +12,133‎ N Exercise and answers ‎ Created page with "<h2>Overview</h2> <p> In this mini-workshop you will familiarize yourself with <b>TADbit</b> (Serra et al., 2017): from FASTQ files to contact matrix and beyond. </p> <p> <b>A Primer into 3D Genomics: A Mini-Workshop</b><br> Juan Antonio Rodríguez, Globe Institute, University of Copenhagen<br> 9 January 2026, DTU </p> <hr> <h2>Outline of the exercises</h2> <ol> <li>Preprocess Hi-C FASTQ data</li> <li>Index reference genome</li> <li>Use TADbit to: <ol>..."
• 11:0011:00, 7 January 2026 diff hist +54‎ SNP calling exercise part 1 ‎No edit summary current
• 10:4710:47, 7 January 2026 diff hist +3,750‎ Alignment exercise ‎No edit summary current Tag: Manual revert
• 10:2910:29, 7 January 2026 diff hist −24‎ Alignment exercise ‎No edit summary
• 10:2210:22, 7 January 2026 diff hist +7,320‎ Alignment exercise ‎No edit summary
• 10:1810:18, 7 January 2026 diff hist +5‎ Alignment exercise ‎No edit summary
• 10:1310:13, 7 January 2026 diff hist +52‎ Postprocess exercise ‎No edit summary
• 10:1110:11, 7 January 2026 diff hist +25‎ SNP calling exercise part 1 ‎No edit summary

6 January 2026

• 15:5315:53, 6 January 2026 diff hist −11,051‎ Alignment exercise ‎No edit summary
• 15:3615:36, 6 January 2026 diff hist −94‎ Program 2026 ‎No edit summary
• 14:4314:43, 6 January 2026 diff hist −110‎ Denovo exercise ‎No edit summary
• 14:4114:41, 6 January 2026 diff hist +643‎ Denovo exercise ‎No edit summary
• 14:3814:38, 6 January 2026 diff hist +315‎ Ancient DNA exercise ‎No edit summary
• 14:3414:34, 6 January 2026 diff hist +58‎ Ancient DNA exercise ‎No edit summary