All public logs
Jump to navigation
Jump to search
Combined display of all available logs of 22111. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).
- 11:00, 15 March 2024 WikiSysop talk contribs uploaded File:Psiblastp nr.png
- 10:59, 15 March 2024 WikiSysop talk contribs created page File:Blastp pdb.png
- 10:59, 15 March 2024 WikiSysop talk contribs uploaded File:Blastp pdb.png
- 10:59, 15 March 2024 WikiSysop talk contribs created page ExPSIBLAST (Created page with "Originally written by: Morten Nielsen — some editing by Rasmus Wernersson and Bent Petersen — new version by Henrik Nielsen. ==Introduction== Earlier in the course you have used the BLAST program to perform fast alignments of DNA and protein sequences. As shown in today's lecture, BLAST will often fail to recognize relationships between proteins with low sequence similarity. In today's exercise, you will use the iterative BLAST program (PSI-BLAST) to calculate sequ...")
- 10:58, 15 March 2024 WikiSysop talk contribs created page ExLogo+Matrix-answers (Created page with "Answers to "Construction of sequence logos and weight matrices" == Identification of MHC binding motifs == '''QUESTION 1:''' Which positions are anchor position and what amino acids are found at the anchor positions? :Anchor positions are P2 and P9. Preferred amino acids are P2: LM, P9: VL. You don't have to take the "Auxiliary anchor" into account. == Construction of weightmatrices == '''Unnumbered question:''' Have a look at the sequence logo. How many differen...")
- 10:54, 15 March 2024 WikiSysop talk contribs created page File:Weight.png
- 10:54, 15 March 2024 WikiSysop talk contribs uploaded File:Weight.png
- 10:51, 15 March 2024 WikiSysop talk contribs created page File:HLA-A0201.gif
- 10:51, 15 March 2024 WikiSysop talk contribs uploaded File:HLA-A0201.gif
- 10:51, 15 March 2024 WikiSysop talk contribs created page Exercise: Construction of sequence logos and weight matrices (Created page with "Exercise by: [https://www.dtu.dk/service/telefonbog/Person?id=5973 Morten Nielsen] - editing by Rasmus Wernerson ==Overview== You shall use Bioinformatics tools to predict peptide-MHC binding and select potential epitope vaccine candidates. The exercise has four parts: #Identification of MHC binding motif #Visualize the motif using sequence logos #Training of MHC binding prediction methods #Use the MHC binding prediction method to select potential epitope vaccine cand...")
- 10:42, 15 March 2024 WikiSysop talk contribs created page File:Q11 pseudo 200.png
- 10:42, 15 March 2024 WikiSysop talk contribs uploaded File:Q11 pseudo 200.png
- 10:42, 15 March 2024 WikiSysop talk contribs created page File:Q11 pseudo 00.png
- 10:42, 15 March 2024 WikiSysop talk contribs uploaded File:Q11 pseudo 00.png
- 10:41, 15 March 2024 WikiSysop talk contribs created page File:Q9 EUK.png
- 10:41, 15 March 2024 WikiSysop talk contribs uploaded File:Q9 EUK.png
- 10:41, 15 March 2024 WikiSysop talk contribs created page File:Q8 gram pos.png
- 10:41, 15 March 2024 WikiSysop talk contribs uploaded File:Q8 gram pos.png
- 10:41, 15 March 2024 WikiSysop talk contribs created page File:Q8 gram neg.png
- 10:41, 15 March 2024 WikiSysop talk contribs uploaded File:Q8 gram neg.png
- 10:40, 15 March 2024 WikiSysop talk contribs created page File:Q8 EUK.png
- 10:40, 15 March 2024 WikiSysop talk contribs uploaded File:Q8 EUK.png
- 10:40, 15 March 2024 WikiSysop talk contribs created page File:Q7 yeast 40-50 zoom freq.png
- 10:40, 15 March 2024 WikiSysop talk contribs uploaded File:Q7 yeast 40-50 zoom freq.png
- 10:39, 15 March 2024 WikiSysop talk contribs created page File:Q7 yeast 40-50 zoom2.png
- 10:39, 15 March 2024 WikiSysop talk contribs uploaded File:Q7 yeast 40-50 zoom2.png
- 10:39, 15 March 2024 WikiSysop talk contribs created page File:Q7 yeast 40-50 zoom1.png
- 10:39, 15 March 2024 WikiSysop talk contribs uploaded File:Q7 yeast 40-50 zoom1.png
- 10:39, 15 March 2024 WikiSysop talk contribs created page File:Q7 yeast 25-75.png
- 10:39, 15 March 2024 WikiSysop talk contribs uploaded File:Q7 yeast 25-75.png
- 10:38, 15 March 2024 WikiSysop talk contribs created page File:Q6 ecoli logo.png
- 10:38, 15 March 2024 WikiSysop talk contribs uploaded File:Q6 ecoli logo.png
- 10:38, 15 March 2024 WikiSysop talk contribs created page File:Q5 ecoli logo.png
- 10:38, 15 March 2024 WikiSysop talk contribs uploaded File:Q5 ecoli logo.png
- 10:37, 15 March 2024 WikiSysop talk contribs created page File:Q4 spombe acceptor.png
- 10:37, 15 March 2024 WikiSysop talk contribs uploaded File:Q4 spombe acceptor.png
- 10:37, 15 March 2024 WikiSysop talk contribs created page File:Q4 scer acceptor.png
- 10:37, 15 March 2024 WikiSysop talk contribs uploaded File:Q4 scer acceptor.png
- 10:36, 15 March 2024 WikiSysop talk contribs created page File:Q4 Athal acceptor.png
- 10:36, 15 March 2024 WikiSysop talk contribs uploaded File:Q4 Athal acceptor.png
- 10:36, 15 March 2024 WikiSysop talk contribs created page File:Q4 dmel acceptor.png
- 10:36, 15 March 2024 WikiSysop talk contribs uploaded File:Q4 dmel acceptor.png
- 10:36, 15 March 2024 WikiSysop talk contribs created page File:Q4 hs acceptor.png
- 10:36, 15 March 2024 WikiSysop talk contribs uploaded File:Q4 hs acceptor.png
- 10:35, 15 March 2024 WikiSysop talk contribs created page File:Q4 spombe.png
- 10:35, 15 March 2024 WikiSysop talk contribs uploaded File:Q4 spombe.png
- 10:35, 15 March 2024 WikiSysop talk contribs created page File:Q4 scer donor.png
- 10:35, 15 March 2024 WikiSysop talk contribs uploaded File:Q4 scer donor.png
- 10:34, 15 March 2024 WikiSysop talk contribs created page File:Q4 Athal donor.png
- 10:34, 15 March 2024 WikiSysop talk contribs uploaded File:Q4 Athal donor.png
