User contributions for Carol
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24 October 2025
- 14:4114:41, 24 October 2025 diff hist +2,006 Bcell Epitope prediction No edit summary
- 13:2513:25, 24 October 2025 diff hist +2,695 N Bcell Epitope prediction Created page with "We want to look for epitopes on the HIV GP120 protein. We will use both sequence-based and structure-based methods. Input data. Go to the pdb homepage and look for the pdb entry 4LSP. It is GP120 complexed with a broadly neutralizing antibody. These antibodies are extremely powerful, since they are effective against many different strains. Q1: Download both the structure (pdb) and the sequence (fasta) of the proteins in this entry. Which proteins are in chain G, L and..."
- 13:1213:12, 24 October 2025 diff hist +7,333 N Epitope prediction Created page with "'''B-cell epitope prediction exercise''' VEGF (vascular endothelial growth factor) is a target in cancer therapies, being the protein responsible for vascularization of tumoral tissue. The murine anti-VEGF antibody has been proved to be effective in blocking VEGF, but it is immunogenic. The Bevacizumab is the commercial, humanized version of the antibody. Let’s reproduce its humanization. Anti-VEGF Humanization The sequence of the murine antibody is: >Light chai..." current
20 October 2025
- 17:1217:12, 20 October 2025 diff hist +7,336 N Antibody Modelling Created page with "'''Humanization of the anti-VEGF antibody''' VEGF (vascular endothelial growth factor) is a target in cancer therapies, being the protein responsible for vascularization of tumoral tissue. The murine anti-VEGF antibody has been proved to be effective in blocking VEGF, but it is immunogenic. The Bevacizumab is the commercial, humanized version of the antibody. Let’s reproduce its humanization. Anti-VEGF Humanization The sequence of the murine antibody is: >Light c..." current
3 September 2025
- 03:5703:57, 3 September 2025 diff hist −28 IEDB →Epitope Conservancy Analysis of a SARS-CoV2 Peptide Vaccine current
- 03:5403:54, 3 September 2025 diff hist −189 IEDB →Epitope Conservancy Analysis of a SARS-CoV2 Peptide Vaccine
- 03:5203:52, 3 September 2025 diff hist −80 IEDB →Population Coverage of a SARS-CoV2 Peptide Vaccine
29 August 2025
- 12:1512:15, 29 August 2025 diff hist −19 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Nov 5 — Predictions in Autoimmunity current
- 12:1412:14, 29 August 2025 diff hist +24 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Oct 29 — Vaccine design
- 12:1312:13, 29 August 2025 diff hist −14 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Oct 22 — TCR interaction models and TCR repertoires
- 12:1312:13, 29 August 2025 diff hist −6 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Oct 8 — Antigen Processing and Immunogenicity
- 12:1212:12, 29 August 2025 diff hist −25 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Oct 1 — MHC binding predictions
- 12:1212:12, 29 August 2025 diff hist +7 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Sep 17 — MHC binding predictions
- 12:1212:12, 29 August 2025 diff hist +7 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Sep 24 — MHC binding predictions
- 12:1112:11, 29 August 2025 diff hist −24 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Sep 17 — Antigen Processing and Presentation
- 12:1112:11, 29 August 2025 diff hist −677 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Sep 17 — Allergenicity prediction
- 12:1012:10, 29 August 2025 diff hist +20 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Sep 10 — B cell epitopes
- 12:0912:09, 29 August 2025 diff hist −2 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Sep 10 — B cell epitopes
7 August 2025
- 14:2114:21, 7 August 2025 diff hist 0 22145 Immunological Bioinformatics Course Programme Fall 2025 →DTU Learn Link
- 14:1814:18, 7 August 2025 diff hist +165 22145 Immunological Bioinformatics Course Programme Fall 2025 →Exam
- 14:0914:09, 7 August 2025 diff hist −6 22145 Immunological Bioinformatics Course Programme Fall 2025 →Course content
- 14:0614:06, 7 August 2025 diff hist +2 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Dec 3 — Poster session
- 14:0614:06, 7 August 2025 diff hist 0 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Dec 3 — Poster session
- 14:0614:06, 7 August 2025 diff hist +31 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Dec 3 — Poster session
- 14:0514:05, 7 August 2025 diff hist +1 22145 Immunological Bioinformatics Course Programme Fall 2025 No edit summary
- 14:0414:04, 7 August 2025 diff hist +186 22145 Immunological Bioinformatics Course Programme Fall 2025 No edit summary
- 13:5513:55, 7 August 2025 diff hist 0 22145 Immunological Bioinformatics Course Programme Fall 2025 →Wednesday, Dec 5 — Poster session
- 13:5413:54, 7 August 2025 diff hist +44 22145 Immunological Bioinformatics Course Programme Fall 2025 →Course content
- 13:5313:53, 7 August 2025 diff hist −23 22145 Immunological Bioinformatics Course Programme Fall 2025 No edit summary
- 13:1413:14, 7 August 2025 diff hist +17 22145 Immunological Bioinformatics Course Programme Fall 2025 No edit summary
- 13:1013:10, 7 August 2025 diff hist +13,227 N 22145 Immunological Bioinformatics Course Programme Fall 2025 Created page with "== General information == === Where and when === Wednesday from 8 to 12 in '''building 208, holdlokale 3/065''', starting on '''Wednesday, Sep 4 at 8:00'''. === Teachers === * [https://www.dtu.dk/Person/cwis?id=142840&entity=profile Carolina Barra Quaglia] — Associate professor, course responsible. * [https://www.dtu.dk/person/morten-nielsen?id=5973&entity=profile Morten Nielsen] — Professor, course responsible. === Teaching assistant === * [https://w..."
11 November 2024
- 15:2415:24, 11 November 2024 diff hist −23 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Nov 13 — Beginning Project work current
- 15:2415:24, 11 November 2024 diff hist +60 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Nov 6 — Predictions in Autoimmunity
- 15:2315:23, 11 November 2024 diff hist −70 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Nov 13 — Beginning Project work
27 August 2024
- 19:5719:57, 27 August 2024 diff hist −87 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Oct 23 — TCR interaction models and TCR repertoires
- 19:5619:56, 27 August 2024 diff hist −115 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Oct 23 — TCR interaction models and TCR repertoires
25 August 2024
- 22:3622:36, 25 August 2024 diff hist −53 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Nov 6 — Weight matrices and other prediction methods
- 22:3522:35, 25 August 2024 diff hist −26 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Nov 13 — Beginning Project work
- 22:3522:35, 25 August 2024 diff hist −6 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Oct 23 — TCR interaction models and TCR repertoires
- 22:3422:34, 25 August 2024 diff hist +14 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Oct 2 — MHC binding predictions
- 22:3422:34, 25 August 2024 diff hist −136 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Sep 18 — Allergenicity prediction
- 21:1721:17, 25 August 2024 diff hist −1 22145 Immunological Bioinformatics Course Programme Fall 2024 →Wednesday, Sep 4 — Introduction & databases
- 21:1521:15, 25 August 2024 diff hist −1 22145 Immunological Bioinformatics Course Programme Fall 2024 →Exam
- 21:0521:05, 25 August 2024 diff hist +1 22145 Immunological Bioinformatics Course Programme Fall 2024 →Hand-ins
- 21:0321:03, 25 August 2024 diff hist −20 22145 Immunological Bioinformatics Course Programme Fall 2024 →Hand-ins
- 21:0321:03, 25 August 2024 diff hist −211 22145 Immunological Bioinformatics Course Programme Fall 2024 →Hand-ins
- 21:0121:01, 25 August 2024 diff hist −2 22145 Immunological Bioinformatics Course Programme Fall 2024 →Where and when
- 21:0121:01, 25 August 2024 diff hist −52 22145 Immunological Bioinformatics Course Programme Fall 2024 →Where and when
- 20:5920:59, 25 August 2024 diff hist −2,238 22145 Immunological Bioinformatics Course Programme Fall 2024 No edit summary
- 20:0220:02, 25 August 2024 diff hist +16,193 N 22145 Immunological Bioinformatics Course Programme Fall 2024 Created page with "== General information == === Where and when === Lectures and exercises will take place every Wednesday morning from 8 to 12 in '''Holdlokale 3/065, building 208''', starting on '''Wednesday, Sep 4 at 8:00'''. === Teachers === * [https://www.dtu.dk/Person/cwis?id=142840&entity=profile Carolina Barra Quaglia] — Associate professor, course responsible. * [https://www.dtu.dk/person/morten-nielsen?id=5973&entity=profile Morten Nielsen] — Professor, course..."