Postprocess exercise: Revision history

Jump to navigation Jump to search

Diff selection: Mark the radio buttons of the revisions to compare and hit enter or the button at the bottom.
Legend: (cur) = difference with latest revision, (prev) = difference with preceding revision, m = minor edit.

19 March 2024

  • curprev 16:2916:29, 19 March 2024‎ WikiSysop talk contribs‎ 3,530 bytes +3,530‎ Created page with "<H2>Overview</H2> First: <OL> <LI>Navigate to your home directory: <LI>Create a directory called "postalign" <LI>Navigate to the directory you just created. </OL> In this exercise, we will pre-process bam-files so they are ready for SNP calling. This is necessary to reduce the high number of potential false SNPs that will get called. You will try to: <OL> <LI>Mark read duplicates from the BAM-files <LI>Merge BAM files </OL> <H2>Duplicate removal</H2> <p>We are..."
Retrieved from "https://teaching.healthtech.dtu.dk/22126/index.php/Postprocess_exercise"