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  1. 22118/22168 Advanced Unix & Python for Bioinformaticians
  2. Aligning expectations
  3. Artificial Neural Network
  4. Beginning Unix
  5. Beginning classes
  6. Beginning unit test
  7. Biological knowledge needed in the course
  8. Code construction
  9. Collaborative git
  10. Collection of files
  11. Comprehension, generators, iteration
  12. Course preparation
  13. Data analysis
  14. Data mining in NCBI databases
  15. Example code - Classes
  16. Example code - Comprehension
  17. Example code - Functions
  18. Example code - Inheritance issues
  19. Example code - Misc
  20. Example code - Unit test
  21. Example code - parsing command line options
  22. Find short virus genes with disulfid bridges
  23. Find the mature part of human genes with a signal peptide
  24. Fun with biology - find english words
  25. Functions, namespace, memory management
  26. Heuristic methods for fair sharing
  27. Human genes with activities in more than one region of the cell
  28. Intermediate Unix
  29. Intermediate classes
  30. Intermediate unit test
  31. K-means clustering
  32. K-nearest neighbor (k-NN) continuous variable estimation
  33. Last words
  34. Mini projects
  35. Pairwise alignment
  36. Positive proteins
  37. Programme
  38. Project list
  39. QT clustering
  40. Read trimmer for Next-Generation-Sequencing data
  41. Resistance to antibiotics
  42. Runtime evaluation
  43. Score sequence data with a PSSM
  44. Searching for motifs in sequences
  45. Shortest path in graph
  46. Solo git
  47. Spider toxins
  48. Text mining MEDLINE abstracts
  49. Unit test - start of reverse polish notation class

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