User contributions for Carol
Jump to navigation
Jump to search
5 November 2025
- 19:5919:59, 5 November 2025 diff hist +19 Exercise PSI-BLAST →Finding a remote homolog (Optional)
- 19:5919:59, 5 November 2025 diff hist +88 Exercise PSI-BLAST →Reflection time
- 19:5619:56, 5 November 2025 diff hist −149 Exercise PSI-BLAST No edit summary
- 19:3019:30, 5 November 2025 diff hist −561 Exercise PSI-BLAST →Trying another approach
- 19:2919:29, 5 November 2025 diff hist −289 Exercise PSI-BLAST →Saving and reusing the PSSM
- 19:0719:07, 5 November 2025 diff hist +145 Exercise PSI-BLAST →Saving and reusing the PSSM
- 19:0319:03, 5 November 2025 diff hist −145 Exercise PSI-BLAST →Saving and reusing the PSSM
- 19:0119:01, 5 November 2025 diff hist −96 Exercise PSI-BLAST →Saving and reusing the PSSM
- 18:5218:52, 5 November 2025 diff hist +220 Exercise PSI-BLAST →Saving and reusing the PSSM
- 18:4718:47, 5 November 2025 diff hist +239 Exercise PSI-BLAST →Saving and reusing the PSSM
- 18:3718:37, 5 November 2025 diff hist +508 Exercise PSI-BLAST →Saving and reusing the PSSM
- 18:2818:28, 5 November 2025 diff hist +12 Exercise PSI-BLAST →Constructing the PSSM
- 18:2718:27, 5 November 2025 diff hist −92 Exercise PSI-BLAST →Constructing the PSSM
- 18:2618:26, 5 November 2025 diff hist +137 Exercise PSI-BLAST →Constructing the PSSM
- 18:0018:00, 5 November 2025 diff hist +271 Exercise PSI-BLAST →Trying another approach
- 17:5817:58, 5 November 2025 diff hist 0 Exercise PSI-BLAST →Constructing the PSSM
- 17:5317:53, 5 November 2025 diff hist +6 Exercise PSI-BLAST →Constructing the PSSM Tag: Manual revert
- 17:5317:53, 5 November 2025 diff hist +1 Exercise PSI-BLAST →Constructing the PSSM
- 17:5317:53, 5 November 2025 diff hist −6 Exercise PSI-BLAST →Constructing the PSSM
- 17:5317:53, 5 November 2025 diff hist −1 Exercise PSI-BLAST →Constructing the PSSM
- 17:5217:52, 5 November 2025 diff hist 0 Exercise PSI-BLAST →Constructing the PSSM
- 17:5217:52, 5 November 2025 diff hist +138 Exercise PSI-BLAST →Trying another approach
- 17:5017:50, 5 November 2025 diff hist +6 Exercise PSI-BLAST →Constructing the PSSM
- 17:5017:50, 5 November 2025 diff hist +54 Exercise PSI-BLAST →Constructing the PSSM
- 17:4917:49, 5 November 2025 diff hist 0 N File:PSI-BLAST firstrun.png No edit summary current
- 17:4717:47, 5 November 2025 diff hist +1 Exercise PSI-BLAST →Trying another approach
- 17:3317:33, 5 November 2025 diff hist +271 Exercise PSI-BLAST →Trying another approach
- 17:2717:27, 5 November 2025 diff hist −340 Exercise PSI-BLAST →Trying another approach
- 14:5514:55, 5 November 2025 diff hist −12 Exercise PSI-BLAST →Trying another approach
- 14:4114:41, 5 November 2025 diff hist +10 Exercise PSI-BLAST →When BLAST fails
- 14:4114:41, 5 November 2025 diff hist +110 Exercise PSI-BLAST →When BLAST fails
- 14:3814:38, 5 November 2025 diff hist +150 Exercise PSI-BLAST →When BLAST fails
- 14:3414:34, 5 November 2025 diff hist −239 Exercise PSI-BLAST →When BLAST fails
- 14:3214:32, 5 November 2025 diff hist −48 Exercise PSI-BLAST →When BLAST fails
- 14:2914:29, 5 November 2025 diff hist +4 Exercise PSI-BLAST →When BLAST fails
- 14:2814:28, 5 November 2025 diff hist −2 Exercise PSI-BLAST →When BLAST fails
- 14:2814:28, 5 November 2025 diff hist +47 Exercise PSI-BLAST →When BLAST fails
- 14:2714:27, 5 November 2025 diff hist +3 Exercise PSI-BLAST →When BLAST fails
- 14:2514:25, 5 November 2025 diff hist −5 Exercise PSI-BLAST →When BLAST fails
- 14:2514:25, 5 November 2025 diff hist −4 Exercise PSI-BLAST →When BLAST fails
- 14:2414:24, 5 November 2025 diff hist +1 Exercise PSI-BLAST →When BLAST fails
- 14:2414:24, 5 November 2025 diff hist 0 Exercise PSI-BLAST →When BLAST fails
- 14:2314:23, 5 November 2025 diff hist +2 Exercise PSI-BLAST →When BLAST fails
- 14:2214:22, 5 November 2025 diff hist +9 Exercise PSI-BLAST No edit summary
- 14:2114:21, 5 November 2025 diff hist −4 Exercise PSI-BLAST →When BLAST fails
- 14:2114:21, 5 November 2025 diff hist +172 Exercise PSI-BLAST →When BLAST fails
- 14:1714:17, 5 November 2025 diff hist −246 Exercise PSI-BLAST →Introduction: What are orphan genes?
- 14:1714:17, 5 November 2025 diff hist +14,551 N Exercise PSI-BLAST Created page with "Written by: Carolina Barra Quaglia ==Overview== In this exercise you will learn how to * Critically assess when BLAST fails (e.g., no significant hits) and explore alternative strategies. * Use PSI-BLAST to search for remote homologues of a given protein sequence (an orphan gene). * Interpret iterative PSI-BLAST output (number of hits, coverage, E-value, identity/positives) to assess significance. * Save and reuse a PSSM (profile) to search specialized databases (e.g.,..."
- 13:4913:49, 5 November 2025 diff hist 0 N File:C22orf45.txt No edit summary current
- 12:0812:08, 5 November 2025 diff hist +1 ExPSIBLAST →Trying another approach
