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1 October 2024
- 08:5208:52, 1 October 2024 diff hist 0 22111:Course plan autumn 2024 →Tuesday Oct 1 — BLAST
- 08:4608:46, 1 October 2024 diff hist +28 Exercise: BLAST3 →NCBI
- 08:4608:46, 1 October 2024 diff hist +26 Exercise: BLAST3 →Genome specific analysis of histones
- 08:3108:31, 1 October 2024 diff hist +59 Exercise: BLAST3 →Part 3: using BLAST to transfer functional information by finding homologs
- 08:2908:29, 1 October 2024 diff hist +14 Exercise: BLAST3 →BLAST example 2
- 08:1308:13, 1 October 2024 diff hist +1 ExBlast-Answers3 No edit summary
- 05:5505:55, 1 October 2024 diff hist 0 Exercise: BLAST3 →Part 2.0: Create your first Python Notebook
- 05:2605:26, 1 October 2024 diff hist 0 Exercise: BLAST3 →Random protein sequences and BLASTP
- 05:2205:22, 1 October 2024 diff hist +9 ExBlast-Answers3 →Part 3: using BLAST to transfer functional information by finding homologs
- 05:1805:18, 1 October 2024 diff hist −157 Exercise: BLAST3 →BLAST example 2
- 05:1705:17, 1 October 2024 diff hist +9 Exercise: BLAST3 →BLAST example 1
- 05:1605:16, 1 October 2024 diff hist +129 Exercise: BLAST3 →Part 3: using BLAST to transfer functional information by finding homologs
- 05:1305:13, 1 October 2024 diff hist −348 ExBlast-Answers3 →Part 2: Assessing the statistical significance of BLAST hits
- 05:1105:11, 1 October 2024 diff hist −22 Exercise: BLAST3 →Random protein sequences and BLASTP
- 05:1005:10, 1 October 2024 diff hist −375 Exercise: BLAST3 →Random protein sequences and BLASTP
- 05:0705:07, 1 October 2024 diff hist 0 Exercise: BLAST3 →Random protein sequences and BLASTP
- 05:0405:04, 1 October 2024 diff hist −38 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 03:3003:30, 1 October 2024 diff hist −3 Exercise: BLAST3 →Random DNA sequences and BLASTN
30 September 2024
- 21:2821:28, 30 September 2024 diff hist −166 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 21:2621:26, 30 September 2024 diff hist −50 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 21:2521:25, 30 September 2024 diff hist −50 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 21:2421:24, 30 September 2024 diff hist −116 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 21:2321:23, 30 September 2024 diff hist −117 ExBlast-Answers3 →QUESTION 2.2
- 21:1921:19, 30 September 2024 diff hist −77 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 21:1621:16, 30 September 2024 diff hist −119 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 21:1421:14, 30 September 2024 diff hist −17 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 21:1221:12, 30 September 2024 diff hist −232 Exercise: BLAST3 →Random DNA sequences and BLASTN
- 21:0121:01, 30 September 2024 diff hist +2 Exercise: BLAST3 →Part 0: Create your first Python Notebook
- 21:0021:00, 30 September 2024 diff hist +1 Exercise: BLAST3 →Links
- 21:0021:00, 30 September 2024 diff hist −275 Exercise: BLAST3 →Links
- 20:5920:59, 30 September 2024 diff hist +2,825 Exercise: BLAST3 →Part 2: Assessing the statistical significance of BLAST hits
- 20:5420:54, 30 September 2024 diff hist −232 Exercise: BLAST3 →Part 2: Assessing the statistical significance of BLAST hits
- 20:4920:49, 30 September 2024 diff hist −18 ExBlast-Answers3 →Part 1: Your first BLAST search
- 20:4520:45, 30 September 2024 diff hist +4 ExBlast-Answers3 →QUESTION 1.4
- 20:4120:41, 30 September 2024 diff hist −14 ExBlast-Answers3 No edit summary
- 20:4020:40, 30 September 2024 diff hist −12 ExBlast-Answers3 No edit summary
- 20:3920:39, 30 September 2024 diff hist +23,383 N ExBlast-Answers3 Created page with "Answers to the BLAST exercise, by Henrik Nielsen. Values for database sizes etc. retrieved March 7, 2020 ==Part 1: Your first BLAST search== ===QUESTION 1.1=== * ''what is the identifier (Accession)?'' :OL351605 or M57671 (Note that the latter was also part of the sequence name for your query sequence!) * ''what is the alignment score ("Max score in bits")?'' :The max score is 780 bits (Raw score is 864) * ''what is the percent identity and query coverage?'' :100% * '..."
- 20:3720:37, 30 September 2024 diff hist +14 Exercise: BLAST3 →Part 1: Your first BLAST search
- 20:3620:36, 30 September 2024 diff hist +13 Exercise: BLAST3 →Search against Human G+T
- 20:2420:24, 30 September 2024 diff hist +3 Exercise: BLAST3 →Search against NR
- 20:2220:22, 30 September 2024 diff hist +1 Exercise: BLAST3 →Part 1: Your first BLAST search
- 20:1820:18, 30 September 2024 diff hist +4 Exercise: BLAST3 →Part 1: Your first BLAST search
- 20:1720:17, 30 September 2024 diff hist +52 Exercise: BLAST3 →Part 1: Your first BLAST search
- 19:5819:58, 30 September 2024 diff hist +1 Exercise: BLAST3 →Links
- 19:5619:56, 30 September 2024 diff hist −2 Exercise: BLAST3 →Introduction
- 19:5619:56, 30 September 2024 diff hist +8 Exercise: BLAST3 No edit summary
21 September 2024
- 22:5522:55, 21 September 2024 diff hist −56 Exercise: BLAST3 No edit summary
- 22:4922:49, 21 September 2024 diff hist −75 Exercise: BLAST3 →BLASTN search
- 22:4322:43, 21 September 2024 diff hist −18 Exercise: BLAST3 No edit summary
- 22:4022:40, 21 September 2024 diff hist −11 Exercise: BLAST3 No edit summary