Ex handouts igraph

PPI Data visualization: extension to the hand-out exercise

Exercise written by Lars Rønn Olsen and Rasmus Wernersson

This is a short igraph visualization exercise based on the networks and scores derived in the hand-out exercises.

Part 1 - network from AP/MS data

Part 1

• Create a data frame based on the network derived from exercise 5
• Create an edge annotation vector based on the scores calculated in exercise 6.
• load it as an igraph object.
• Plot it with ggraph with a layout you like
• Paste code and screen shot it into your report

Part 2 - network from Y2H data

Part 2

(Same as above - but for the Y2H network)