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• 16:27, 19 March 2024 WikiSysop talk contribs created page Alignment exercise (Created page with " <H2>Overview</H2> First: <OL> <LI>Navigate to your home directory: <LI>Create a directory called "align" <LI>Navigate to the directory you just created. </OL> We will try to align different types of NGS data. # <i>Pseudomonas alcaligenes</i> single-end Illumina reads # Human single-end paired-end Illumina reads <H2><i>P. aeruginosa</i> single-end Illumina reads</H2> <H3>Alignment using bwa mem</H3> <p> We will align some of the single-end reads that we trimmed f...")