Genomic epidemiology solution: Revision history

Jump to navigation Jump to search

Diff selection: Mark the radio buttons of the revisions to compare and hit enter or the button at the bottom.
Legend: (cur) = difference with latest revision, (prev) = difference with preceding revision, m = minor edit.

19 March 2024

  • curprev 16:5616:56, 19 March 2024‎ WikiSysop talk contribs‎ 4,682 bytes +4,682‎ Created page with "Q1. We can use the fastx tools to get this information <pre> fastx_readlength.py --i reads_R1.fastq.gz --gz fastx_readlength.py --i reads_R2.fastq.gz --gz </pre> This should give you the answer. Reads: 2*1408847 = 2,817,694; Bases: 284587094 Task1 - can be accomplished using a quality control tool like fastqc. <pre> mkdir fastqc fastqc -o fastqc reads_R*.fastq.gz firefox fastqc/reads_R1_fastqc.html fastqc/reads_R2_fastqc.html & </pre> Q2. There are no overrepresented..."
Retrieved from "https://teaching.healthtech.dtu.dk/22126/index.php/Genomic_epidemiology_solution"