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27 January 2026
- 10:3210:32, 27 January 2026 diff hist +5,527 N Beginning classes Created page with "__NOTOC__ {| width=500 style="font-size: 10px; float:right; margin-left: 10px; margin-top: -56px;" |Previous: Comprehension, generators, iteration |Next: Intermediate classes |} == Required course material for the lesson == Powerpoint: [https://teaching.healthtech.dtu.dk/material/22118/22118_07-Classes.ppt Classes]<br> Resource: Example code - Classes<br> == Subjects covered == Classes<br> Object Oriented Programming == Exercises to be handed in == The exe..."
- 10:2910:29, 27 January 2026 diff hist +1,466 N Example code - Misc Created page with "__NOTOC__ == Files used in example == Our favorite data file: ''ex1.dat'' == Closest to zero == There are a lot of numbers in this file. Which number is the closest to zero and where is it (row/column) ?<br> This is more complicated because there are both positive and negative numbers in the file.<br> In order to demonstrate some of the new functions/methods, I pull the entire file into memory. This problem could be solved by reading line-by-line and not keeping all the..." current
- 10:2710:27, 27 January 2026 diff hist +12,261 N Example code - Comprehension Created page with "__NOTOC__ == Files used in example == [http://teaching.healthtech.dtu.dk/material/22118/TA_list.txt TA_list.txt]<br> [http://teaching.healthtech.dtu.dk/material/22118/student_list.txt student_list.txt]<br> == Assigning students to TA's, Take 2 == After having used the original program a few times, see [https://teaching.healthtech.dtu.dk/22116/index.php/Example_code_-_Complex_data here], I got dissatisfied with it - the randomness did not ensure even distribution of stud..." current
- 10:2210:22, 27 January 2026 diff hist 0 m Functions, namespace, memory management No edit summary
- 10:2110:21, 27 January 2026 diff hist +6,119 N Comprehension, generators, iteration Created page with "__NOTOC__ {| width=500 style="font-size: 10px; float:right; margin-left: 10px; margin-top: -56px;" |Previous: Functions, namespace, memory management |Next: Beginning classes |} == Required course material for the lesson == Powerpoint: [https://teaching.healthtech.dtu.dk/material/22118/22118_06-Comprehension.ppt Comprehension, generators & iteration]<br> Powerpoint: [https://teaching.healthtech.dtu.dk/material/22118/22118_06-Random.ppt Randomness]<br> Video: [ht..."
- 10:1810:18, 27 January 2026 diff hist 0 m Programme No edit summary
- 10:1310:13, 27 January 2026 diff hist 0 m Programme No edit summary
- 10:1310:13, 27 January 2026 diff hist 0 m Programme No edit summary
- 10:1210:12, 27 January 2026 diff hist +3,538 N Example code - Functions Created page with "__NOTOC__ == File used in example == [http://teaching.healthtech.dtu.dk/material/22118/aln7.fsa aln7.fsa] == Finding consensus sequence from protein alignment == This simple consensus sequence finder simply looks at each position on all the sequences in an alignment and picks the most frequent occurring amino acid as the consensus for that position. In case of tie, the first one according to the sorting algorithm is chosen. Stupid and random, but a good practical example..." current
- 10:1110:11, 27 January 2026 diff hist +4,358 N Functions, namespace, memory management Created page with "__NOTOC__ {| width=500 style="font-size: 10px; float:right; margin-left: 10px; margin-top: -56px;" |Previous: More git |Next: Comprehension, iteration, generators |} == Required course material for the lesson == Powerpoint: [https://teaching.healthtech.dtu.dk/material/22118/22118_05-Functions.ppt Functions] - this will be short as it is a reminder.<br> Powerpoint: [https://teaching.healthtech.dtu.dk/material/22118/22118_05-Namespace.ppt Namespace].<br> Powerpoin..."
- 10:0410:04, 27 January 2026 diff hist +2,873 N Collection of files Created page with "__NOTOC__ Last updated: February 2, 2023 == Files used in various exercises == To download the files to your system, just press the Shift key while you left click on the blue link. Follow the instructions.<br> You can play around with these files as much as you like. If you change or destroy them, just download them again.<br> Put the files in your course folder on your computer.<br> <!-- The files have been zipped together in one convenient download for you.<br> [https:..."
26 January 2026
- 19:1519:15, 26 January 2026 diff hist 0 m 22118/22168 Advanced Unix & Python for Bioinformaticians →Course details current
- 19:0419:04, 26 January 2026 diff hist +104 m 22118/22168 Advanced Unix & Python for Bioinformaticians →Course details
- 17:3217:32, 26 January 2026 diff hist +12 m Programme No edit summary
- 17:2917:29, 26 January 2026 diff hist 0 m Programme No edit summary
- 17:2917:29, 26 January 2026 diff hist +33 m Programme No edit summary
- 17:2717:27, 26 January 2026 diff hist +4 m Programme No edit summary
- 17:2417:24, 26 January 2026 diff hist +1 m Intermediate Unix No edit summary
- 17:2317:23, 26 January 2026 diff hist −1 m Intermediate Unix →Exercises to be handed in
- 17:2217:22, 26 January 2026 diff hist +1 m Beginning Unix →Exercises to be handed in
- 17:2017:20, 26 January 2026 diff hist −149 m Programme No edit summary
7 November 2025
- 15:3915:39, 7 November 2025 diff hist +14 m Intermediate Unix No edit summary
- 15:2615:26, 7 November 2025 diff hist +4 m Intermediate Unix No edit summary
- 15:2615:26, 7 November 2025 diff hist −78 m Intermediate Unix No edit summary
- 15:2115:21, 7 November 2025 diff hist +2,306 N Intermediate Unix Created page with "__NOTOC__ {| width=500 style="font-size: 10px; float:right; margin-left: 10px; margin-top: -56px;" |Previous: None |Next: Python Recap and Objects |} You did do the Course preparation, right!! Otherwise all of this matters not. == Required course material for the lesson == Powerpoint: [https://teaching.healthtech.dtu.dk/material/22113/22113_01-Unix.ppt Introduction to Unix]<br> == Subjects covered == * New Unix commands * Scripting in bash == Exercises to be..."
- 15:1615:16, 7 November 2025 diff hist +131 m Beginning Unix →Exercises to be handed in
- 15:1415:14, 7 November 2025 diff hist −35 m Beginning Unix →Exercises to do after Monday
6 November 2025
- 13:1413:14, 6 November 2025 diff hist +113 m Beginning Unix →Required course material for the lesson
- 13:0513:05, 6 November 2025 diff hist −20 m Beginning Unix →Subjects covered
- 13:0513:05, 6 November 2025 diff hist +5,144 N Beginning Unix Created page with "__NOTOC__ {| width=500 style="font-size: 10px; float:right; margin-left: 10px; margin-top: -56px;" |Previous: Programme |Next: Intermediate Unix |} You did do the Course preparation, right!! Otherwise all of this matters not. == Required course material for the lesson == Powerpoint: [https://teaching.healthtech.dtu.dk/material/22113/22113_01-Unix.ppt Introduction to Unix]<br> The videos are not entirely in sync with the powerpoint, as it has been updated.<..."
- 13:0213:02, 6 November 2025 diff hist 0 m Programme No edit summary
- 12:5812:58, 6 November 2025 diff hist +212 m Course preparation No edit summary current
- 12:5212:52, 6 November 2025 diff hist +339 m Course preparation →WSL/WSL2, Windows Subsystem for Linux
- 12:3812:38, 6 November 2025 diff hist +108 m Course preparation →WSL/WSL2, Windows Subsystem for Linux
- 12:3512:35, 6 November 2025 diff hist +530 m Course preparation →VScode
- 12:2712:27, 6 November 2025 diff hist +58 m Course preparation →VScode
- 12:2612:26, 6 November 2025 diff hist +7 m Course preparation →Other editors
29 October 2025
- 08:2808:28, 29 October 2025 diff hist +106 m 22118/22168 Advanced Unix & Python for Bioinformaticians →Course details
17 October 2025
- 15:3715:37, 17 October 2025 diff hist +9,853 N Course preparation Created page with "Before you meet up on the first day of the course, you will '''have''' to be able to start a terminal in a '''unix''' environment, and to '''edit''' files in the same environment with a text editor. Here is how and what you should do on various Operation Systems (OS). Anything mentioned here is free software. == General remarks about programming environments, IDE's == Some people have discovered tools like Spyder, Jupyter, VScode or PyCharm, which creates an environment..."
- 13:4313:43, 17 October 2025 diff hist −25 m Aligning expectations →Failing the project
- 13:4113:41, 17 October 2025 diff hist −438 m Aligning expectations →Failing the course
- 13:2213:22, 17 October 2025 diff hist +14 m Aligning expectations →Projects, general information
- 13:2113:21, 17 October 2025 diff hist +1 m Aligning expectations →Exercises
- 13:2113:21, 17 October 2025 diff hist +89 m Aligning expectations →Exercises
- 13:1913:19, 17 October 2025 diff hist −14 m Aligning expectations →Knowing the roles at the university
- 13:1713:17, 17 October 2025 diff hist −22 m Aligning expectations →Standard expectations
- 13:1613:16, 17 October 2025 diff hist 0 m Aligning expectations →Fulfilling prerequisites
- 13:1313:13, 17 October 2025 diff hist +2 m Programme No edit summary
- 13:0513:05, 17 October 2025 diff hist +1,080 N Programme Created page with "'''Collection of files''' <font color="red">used in the exercises and lessons</font> - all gathered here. * 01/09 Lesson 1: Beginning Unix * 08/09 Lesson 2: intermediate Unix * 15/09 Lesson 3: Git on command line * 22/09 Lesson 4: More Git * 29/09 Lesson 5: Functions, scope, garbage collection * 06/10 Lesson 6: Comprehension, iteration, generators, [https://evaluering.dtu.dk/ Midterm evaluation] - part 1 * Fall holidays * 20/10 Lesson 7 Beg..."