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  1. 22118/22168 Advanced Unix & Python for Bioinformaticians
  2. Aligning expectations
  3. Artificial Neural Network
  4. Beginning Unix
  5. Beginning classes
  6. Beginning unit test
  7. Biological knowledge needed in the course
  8. Changing existing code base
  9. Code construction
  10. Collaborative git
  11. Collection of files
  12. Comprehension, generators, iteration
  13. Course preparation
  14. Data analysis
  15. Data mining in NCBI databases
  16. Example code - Classes
  17. Example code - Comprehension
  18. Example code - Functions
  19. Example code - Inheritance issues
  20. Example code - Misc
  21. Example code - Unit test
  22. Example code - parsing command line options
  23. Find short virus genes with disulfid bridges
  24. Find the mature part of human genes with a signal peptide
  25. Fun with biology - find english words
  26. Functions, namespace, memory management
  27. Heuristic methods for fair sharing
  28. Human genes with activities in more than one region of the cell
  29. Intermediate Unix
  30. Intermediate classes
  31. Intermediate unit test
  32. K-means clustering
  33. K-nearest neighbor (k-NN) continuous variable estimation
  34. Last words
  35. Mini projects
  36. Pairwise alignment
  37. Positive proteins
  38. Programme
  39. Project list
  40. QT clustering
  41. Read trimmer for Next-Generation-Sequencing data
  42. Resistance to antibiotics
  43. Runtime evaluation
  44. Score sequence data with a PSSM
  45. Searching for motifs in sequences
  46. Shortest path in graph
  47. Solo git
  48. Spider toxins
  49. Text mining MEDLINE abstracts
  50. Unit test - start of reverse polish notation class

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