Checklist for computers - Revision history

Henni: /* Software */

2024-11-15T14:58:45Z

Software

← Older revision		Revision as of 16:58, 15 November 2024
Line 32:		Line 32:

	; PyMol		; PyMol
	: Download and install from https://pymol.org/2/, see the [https://teaching.healthtech.dtu.dk/material/22111/PyMol_tutorial2017_v4.pdf PyMol tutorial] and the exercises in [[Protein Structure and Visualization\|PDB & PyMol]], and [[Exercise:Malaria Vaccine\|Malaria vaccine]]. <!-- , and [[ExPSIBLAST\|PSI-BLAST]]. -->		: Download and install from https://pymol.org/, see the [https://teaching.healthtech.dtu.dk/material/22111/PyMol_tutorial2017_v4.pdf PyMol tutorial] and the exercises in [[Protein Structure and Visualization\|PDB & PyMol]], and [[Exercise:Malaria Vaccine\|Malaria vaccine]]. <!-- , and [[ExPSIBLAST\|PSI-BLAST]]. -->
	: A license file is found on Learn → Content → Week 06.		: A license file is found on Learn → Content → Week 06.

WikiSysop: /* Software */

2024-03-15T10:46:53Z

Software

← Older revision		Revision as of 12:46, 15 March 2024
Line 32:		Line 32:

	; PyMol		; PyMol
	: Download and install from https://pymol.org/2/, see the [https://teaching.healthtech.dtu.dk/material/22111/PyMol_tutorial2017_v4.pdf PyMol tutorial] and the exercises in [[~~ExPyMol~~\|PDB & PyMol]], and [[Exercise:Malaria Vaccine\|Malaria vaccine]]. <!-- , and [[ExPSIBLAST\|PSI-BLAST]]. -->		: Download and install from https://pymol.org/2/, see the [https://teaching.healthtech.dtu.dk/material/22111/PyMol_tutorial2017_v4.pdf PyMol tutorial] and the exercises in [[Protein Structure and Visualization\|PDB & PyMol]], and [[Exercise:Malaria Vaccine\|Malaria vaccine]]. <!-- , and [[ExPSIBLAST\|PSI-BLAST]]. -->
	: A license file is found on Learn → Content → Week 06.		: A license file is found on Learn → Content → Week 06.

WikiSysop: /* Software */

2024-03-15T10:44:23Z

Software

← Older revision		Revision as of 12:44, 15 March 2024
Line 32:		Line 32:

	; PyMol		; PyMol
	: Download and install from https://pymol.org/2/, see the [~~[Media~~:PyMol_tutorial2017_v4.pdf\|PyMol tutorial]] and the exercises in [[ExPyMol\|PDB & PyMol]], and [[Exercise:Malaria Vaccine\|Malaria vaccine]]. <!-- , and [[ExPSIBLAST\|PSI-BLAST]]. -->		: Download and install from https://pymol.org/2/, see the [https://teaching.healthtech.dtu.dk/material/22111/PyMol_tutorial2017_v4.pdf PyMol tutorial] and the exercises in [[ExPyMol\|PDB & PyMol]], and [[Exercise:Malaria Vaccine\|Malaria vaccine]]. <!-- , and [[ExPSIBLAST\|PSI-BLAST]]. -->
	: A license file is found on Learn → Content → Week 06.		: A license file is found on Learn → Content → Week 06.

WikiSysop: Created page with "At the exam in Introduction to Bioinformatics, you are going to use the same resources (web-servers and programs) that you used for the exercises — if your computer has worked fine for all the exercises, it will also work fine for the exam. == Hardware == ; A laptop. : It makes no difference whether you use Windows, Mac, or Linux, as long as you have the listed software. However, an iPad, an Android tablet, or a Chromebook will NOT be enough for the exam. ; A mouse. :..."

2024-03-15T10:42:12Z

Created page with "At the exam in Introduction to Bioinformatics, you are going to use the same resources (web-servers and programs) that you used for the exercises — if your computer has worked fine for all the exercises, it will also work fine for the exam. == Hardware == ; A laptop. : It makes no difference whether you use Windows, Mac, or Linux, as long as you have the listed software. However, an iPad, an Android tablet, or a Chromebook will NOT be enough for the exam. ; A mouse. :..."

New page

At the exam in Introduction to Bioinformatics, you are going to use the same resources (web-servers and programs) that you used for the exercises — if your computer has worked fine for all the exercises, it will also work fine for the exam.

== Hardware ==
; A laptop.
: It makes no difference whether you use Windows, Mac, or Linux, as long as you have the listed software. However, an iPad, an Android tablet, or a Chromebook will NOT be enough for the exam.
; A mouse.
: A mouse is important in order to use PyMOL (see below) optimally. The mouse should have two buttons plus a scroll-wheel in the middle.

== Internet connection ==


Your computer must be able to connect to DTU wi-fi. '''Use the standard DTU net which will be open during your exam; NOT the special exam net.'''

== Software ==
; A modern Internet Browser ([http://www.mozilla.com/ FireFox], Edge, Safari (Mac only), [http://www.google.com/chrome Google Chrome], [http://www.opera.com/ Opera]).
: NB: You ''must'' have FireFox, Chrome, or Opera on your machine, so you are able to switch browser in case Edge (Windows) or Safari (Mac) has trouble with a certain website.


; Geany (or another GOOD plain text editor)
: Download and install from http://geany.org/, see the [[Plain text files and Geany]] exercise.


; PyMol
: Download and install from https://pymol.org/2/, see the [[Media:PyMol_tutorial2017_v4.pdf|PyMol tutorial]] and the exercises in [[ExPyMol|PDB & PyMol]], and [[Exercise:Malaria Vaccine|Malaria vaccine]]. 
: A license file is found on Learn → Content → Week 06.

; Seaview
: Download and install from http://doua.prabi.fr/software/seaview, see [[Exercise: Multiple Alignments (Seaview version)]].


; Text processing software
: for writing your answers. You can e.g. use:
:* Microsoft Word
:* [http://www.openoffice.org/ OpenOffice] / [http://www.neooffice.org/ NeoOffice] / [http://www.libreoffice.org/ LibreOffice]
:* Pages (for Mac).
:* [https://docs.google.com/ Google Docs]

; Tool for making PDF files
: included in Windows 10/11 and Mac.

; Tool for taking screenshots
: included in Microsoft Word, Windows 10/11, and Mac.
: For Windows users we recommend the free program [http://getgreenshot.org/ Greenshot] which can not only take screenshots and copy them to the clipboard, but also make simple edits and annotations in the screenshots.